SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_233800016
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Microglia
Biosample name: C13.DMSO.R1
Genomic region: chr5:150467985-150518581
Size: 50596
Super-enhancer rank 16
Number of SE elements: 23
ChIP density(Case|Control): 65440.8664|6719.1488
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: NDST1 ;
ROSE Overlap NDST1 ; LOC102546298 ;
ROSE Proximal RPS14 ;
ROSE Closest NDST1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_233800016 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers