SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_233800001
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Microglia
Biosample name: C13.DMSO.R1
Genomic region: chr1:16111464-16187871
Size: 76407
Super-enhancer rank 1
Number of SE elements: 18
ChIP density(Case|Control): 112898.9832|8985.4632
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: EPHA2 ;
ROSE Overlap EPHA2 ;
ROSE Proximal FAM131C ; RSG1 ; ARHGEF19 ;
ROSE Closest EPHA2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_233800001 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers