SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_232901060
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Retina
Biosample name: Control
Genomic region: chr16:30063665-30078167
Size: 14502
Super-enhancer rank 1060
Number of SE elements: 2
ChIP density(Case|Control): 25613.4324|2452.2882
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PPP4C ;
ROSE Overlap PPP4C ; ALDOA ;
ROSE Proximal ALDOA ; C16orf92 ; FAM57B ; YPEL3 ; TBX6 ; MAPK3 ; GDPD3 ;
ROSE Closest PPP4C ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_232901060 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers