SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_231800833
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: SNU1750 shTEAD1
Genomic region: chr19:53783889-53789684
Size: 5795
Super-enhancer rank 833
Number of SE elements: 1
ChIP density(Case|Control): 18950.2295|2129.6625
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR371A ;
ROSE Overlap MIR371B ; MIR371A ; MIR373 ; MIR372 ;
ROSE Proximal MIR517C ; MIR527 ; NLRP12 ; MIR518A2 ; MIR1283-2 ; MIR516A1 ; MIR518D ; MIR522 ; MIR519A2 ; MIR521-1 ; MIR516A2 ; MIR516B1 ; MIR519A1 ; MIR520H ;
ROSE Closest MIR371A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_231800833 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers