SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_231701502
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: SNU1750 shLuc
Genomic region: chr17:28327575-28347848
Size: 20273
Super-enhancer rank 1502
Number of SE elements: 5
ChIP density(Case|Control): 25286.5129|7519.2557
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNFAIP1 ;
ROSE Overlap POLDIP2 ; TNFAIP1 ; TMEM97 ; IFT20 ;
ROSE Proximal VTN ; KRT18P55 ; IFT20 ; TMEM199 ; MIR4723 ; SARM1 ; SEBOX ;
ROSE Closest TNFAIP1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_231701502 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers