SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_231701401
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: SNU1750 shLuc
Genomic region: chr2:176122110-176126925
Size: 4815
Super-enhancer rank 1401
Number of SE elements: 1
ChIP density(Case|Control): 20952.4725|2432.538
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: HOXD9 ;
ROSE Overlap HOXD9 ;
ROSE Proximal HOXD8 ; HOXD13 ; HOXD4 ; HOXD12 ; EVX2 ; HOXD11 ; HOXD3 ; HOXD-AS2 ; HOXD10 ; MIR10B ;
ROSE Closest HOXD9 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_231701401 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers