SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_231701188
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: SNU1750 shLuc
Genomic region: chr11:62874524-62891113
Size: 16589
Super-enhancer rank 1188
Number of SE elements: 3
ChIP density(Case|Control): 25261.7292|4900.3906
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SLC3A2 ;
ROSE Overlap SLC3A2 ;
ROSE Proximal SNORD29 ; SNHG1 ; RNU2-2P ; SNORD27 ; SNORD30 ; SNORD26 ; SNORD31 ; WDR74 ; CHRM1 ; SNORD22 ; SNORD28 ; SLC3A2 ; STX5 ; SNORD25 ;
ROSE Closest SLC3A2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_231701188 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers