SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_231701160
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: SNU1750 shLuc
Genomic region: chr12:6924678-6938639
Size: 13961
Super-enhancer rank 1160
Number of SE elements: 2
ChIP density(Case|Control): 26118.2388|5352.6474
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ATN1 ;
ROSE Overlap ATN1 ;
ROSE Proximal PTPN6 ; MIR141 ; ENO2 ; MIR200C ; SCARNA12 ; PHB2 ; RNU7-1 ; C12orf57 ; LRRC23 ; DSTNP2 ; EMG1 ; RPL13P5 ;
ROSE Closest ATN1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_231701160 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers