SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_231700767
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: SNU1750 shLuc
Genomic region: chr12:54325074-54331102
Size: 6028
Super-enhancer rank 767
Number of SE elements: 1
ChIP density(Case|Control): 28840.966|2514.2788
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: COPZ1 ;
ROSE Overlap COPZ1 ;
ROSE Proximal COPZ1 ; CBX5 ; NFE2 ; GPR84 ; LOC102724050 ; MIR148B ; HNRNPA1 ;
ROSE Closest COPZ1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_231700767 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers