SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_231700005
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: SNU1750 shLuc
Genomic region: chr19:53564985-53659421
Size: 94436
Super-enhancer rank 5
Number of SE elements: 20
ChIP density(Case|Control): 168332.17|23873.4208
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC284379 ;
ROSE Overlap ZNF331 ; DPRX ; LOC284379 ;
ROSE Proximal MIR520A ; MIR519E ; MIR519C ; MIR526A1 ; MIR523 ; MIR518F ; MIR515-1 ; MIR1323 ; MIR1283-1 ; MIR518B ; MIR525 ; MIR519B ; MIR520F ; MIR512-2 ; MIR520E ; MIR512-1 ; MIR526B ; MIR498 ; MIR520C ; MIR520B ; MIR518C ;
ROSE Closest LOC284379 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_231700005 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers