SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_231300468
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: YCC22
Genomic region: chr12:120223973-120263813
Size: 39840
Super-enhancer rank 468
Number of SE elements: 18
ChIP density(Case|Control): 25947.792|4159.296
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PXN ;
ROSE Overlap PXN ;
ROSE Proximal SIRT4 ; PXN ; RNU4-1 ; GCN1 ; PXN-AS1 ; RPLP0 ; RNU4-2 ;
ROSE Closest PXN ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_231300468 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers