SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_231300390
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: YCC22
Genomic region: chr19:18279231-18321359
Size: 42128
Super-enhancer rank 390
Number of SE elements: 10
ChIP density(Case|Control): 28305.8032|3222.792
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR3188 ;
ROSE Overlap LSM4 ; MIR3188 ; JUND ;
ROSE Proximal PDE4C ; JUND ; PGPEP1 ; LOC729966 ; KIAA1683 ;
ROSE Closest MIR3188 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_231300390 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers