SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_231300288
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: YCC22
Genomic region: chr1:154970507-154976513
Size: 6006
Super-enhancer rank 288
Number of SE elements: 1
ChIP density(Case|Control): 31623.9924|361.5612
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SHC1 ;
ROSE Overlap SHC1 ; CKS1B ; MIR4258 ;
ROSE Proximal PMVK ; PBXIP1 ; SHC1 ; ZBTB7B ; PYGO2 ; LENEP ; FLAD1 ;
ROSE Closest SHC1 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_231300288 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers