SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_230200401
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: RERFGC1B
Genomic region: chr11:64311063-64336542
Size: 25479
Super-enhancer rank 401
Number of SE elements: 11
ChIP density(Case|Control): 35303.7024|4367.1006
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PRDX5 ;
ROSE Overlap ESRRA ; PRDX5 ; TRMT112 ;
ROSE Proximal RPS6KA4 ; BAD ; GPR137 ; TEX40 ; CCDC88B ; ESRRA ; KCNK4 ; MIR1237 ; PRDX5 ; MIR7155 ;
ROSE Closest PRDX5 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_230200401 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers