SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_230200259
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: RERFGC1B
Genomic region: chr1:151192172-151211638
Size: 19466
Super-enhancer rank 259
Number of SE elements: 7
ChIP density(Case|Control): 40833.8282|2884.8612
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PIP5K1A ;
ROSE Overlap PIP5K1A ;
ROSE Proximal PIP5K1A ; PSMD4 ; TNFAIP8L2-SCNM1 ; SCNM1 ; LYSMD1 ; TMOD4 ; SEMA6C ; VPS72 ;
ROSE Closest PIP5K1A ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_230200259 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers