SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_230200231
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: RERFGC1B
Genomic region: chr19:48614719-48635535
Size: 20816
Super-enhancer rank 231
Number of SE elements: 3
ChIP density(Case|Control): 42939.2448|3007.912
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SPHK2 ;
ROSE Overlap SPHK2 ; RPL18 ; DBP ;
ROSE Proximal CA11 ; SEC1P ; SPACA4 ; NTN5 ; SPHK2 ; SULT2B1 ; RPL18 ; FAM83E ;
ROSE Closest SPHK2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_230200231 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers