SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_229400490
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: IM95
Genomic region: chr13:27952602-27967335
Size: 14733
Super-enhancer rank 490
Number of SE elements: 10
ChIP density(Case|Control): 20148.8508|838.3077
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CDX2 ;
ROSE Overlap CDX2 ;
ROSE Proximal PDX1-AS1 ; ATP5EP2 ; PDX1 ; URAD ;
ROSE Closest CDX2 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_229400490 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers