SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_229400448
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: stomach
Biosample name: IM95
Genomic region: chr19:39398028-39404498
Size: 6470
Super-enhancer rank 448
Number of SE elements: 3
ChIP density(Case|Control): 21274.654|548.009
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ZFP36 ;
ROSE Overlap MED29 ;
ROSE Proximal ZFP36 ; PLEKHG2 ; SUPT5H ; RPS16 ; PAF1 ; MIR4530 ;
ROSE Closest ZFP36 ;
Lasso ;
PreSTIGE ;
ABC ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_229400448 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers