SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227400394
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P42_10wks_M
Genomic region: chr5:150470179-150504657
Size: 34478
Super-enhancer rank 394
Number of SE elements: 12
ChIP density(Case|Control): 16842.503|2347.9518
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC102546298 ;
ROSE Overlap LOC102546298 ; NDST1 ;
ROSE Proximal RPS14 ; NDST1 ;
ROSE Closest LOC102546298 ;
Lasso ;
PreSTIGE ;
ABC TNIP1 ; GPX3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227400394 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers