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Super-enhancer overview

SE ID: SE_02_227400089
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P42_10wks_M
Genomic region: chr16:48361463-48411638
Size: 50175
Super-enhancer rank 89
Number of SE elements: 22
ChIP density(Case|Control): 30491.3475|4224.735
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SIAH1 ;
ROSE Overlap SIAH1 ; LOC100507577 ;
ROSE Proximal ;
ROSE Closest SIAH1 ;
Lasso ;
PreSTIGE ;
ABC ITFG1 ; DNAJA2 ; GPT2 ; C16orf87 ; SIAH1 ; N4BP1 ; SHCBP1 ; PHKB ; LONP2 ; CNEP1R1 ; HEATR3 ; MYLK3 ; PAPD5 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227400089 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers