SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227400020
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P42_10wks_M
Genomic region: chr11:122655647-122756511
Size: 100864
Super-enhancer rank 20
Number of SE elements: 55
ChIP density(Case|Control): 46710.1184|7060.48
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: UBASH3B ;
ROSE Overlap UBASH3B ;
ROSE Proximal ;
ROSE Closest UBASH3B ;
Lasso ;
PreSTIGE ;
ABC MSANTD2 ; SORL1 ; UBASH3B ; ESAM ; C11orf63 ; BSX ; SC5D ; LOC100507283 ; TBCEL ; HSPA8 ; CLMP ; SCN3B ; SPA17 ; TBRG1 ; ZNF202 ; VWA5A ; NRGN ; SIAE ; LOC101929340 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227400020 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers