SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227200988
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr3:124551223-124595705
Size: 44482
Super-enhancer rank 988
Number of SE elements: 11
ChIP density(Case|Control): 14719.0938|3158.222
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: KALRN ;
ROSE Overlap KALRN ;
ROSE Proximal ;
ROSE Closest KALRN ;
Lasso ;
PreSTIGE ;
ABC OSBPL11 ; ZNF148 ; ITGB5 ; UMPS ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200988 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers