SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_227200928
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr1:153356078-153367610
Size: 11532
Super-enhancer rank 928
Number of SE elements: 3
ChIP density(Case|Control): 12737.094|758.8056
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: S100A9 ;
ROSE Overlap S100A9 ;
ROSE Proximal S100A8 ; PGLYRP4 ; S100A7A ; PGLYRP3 ; S100A12 ;
ROSE Closest S100A9 ;
Lasso ;
PreSTIGE ;
ABC S100A8 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200928 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers