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Super-enhancer overview

SE ID: SE_02_227200669
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr4:47467246-47487517
Size: 20271
Super-enhancer rank 669
Number of SE elements: 10
ChIP density(Case|Control): 16358.697|1856.8236
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ATP10D ;
ROSE Overlap ATP10D ;
ROSE Proximal COMMD8 ;
ROSE Closest ATP10D ;
Lasso ;
PreSTIGE ;
ABC COMMD8 ; ATP10D ; NIPAL1 ; NFXL1 ; LOC101927157 ; GABRB1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200669 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers