SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227200565
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr16:19391858-19434905
Size: 43047
Super-enhancer rank 565
Number of SE elements: 10
ChIP density(Case|Control): 18988.0317|3000.3759
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TMC5 ;
ROSE Overlap TMC5 ;
ROSE Proximal TMC5 ;
ROSE Closest TMC5 ;
Lasso ;
PreSTIGE ;
ABC SYT17 ; TMC5 ; GDE1 ; TMC7 ; LOC102723385 ; COQ7 ; CCP110 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200565 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers