SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227200540
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr9:38023620-38070260
Size: 46640
Super-enhancer rank 540
Number of SE elements: 14
ChIP density(Case|Control): 19985.24|3572.624
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SHB ;
ROSE Overlap SHB ;
ROSE Proximal ;
ROSE Closest SHB ;
Lasso ;
PreSTIGE ;
ABC ALDH1B1 ; SHB ; FAM201A ; ANKRD18A ; SLC25A51 ; DCAF10 ; POLR1E ; FBXO10 ; TOMM5 ; EXOSC3 ; TRMT10B ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200540 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers