SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_227200516
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr20:12968301-13012975
Size: 44674
Super-enhancer rank 516
Number of SE elements: 18
ChIP density(Case|Control): 20527.703|3725.8116
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SPTLC3 ;
ROSE Overlap SPTLC3 ;
ROSE Proximal LOC100505515 ; LOC102606466 ; LOC101929486 ;
ROSE Closest SPTLC3 ;
Lasso ;
PreSTIGE ;
ABC SPTLC3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200516 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers