SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227200509
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr7:73156299-73186020
Size: 29721
Super-enhancer rank 509
Number of SE elements: 19
ChIP density(Case|Control): 19618.8321|2624.3643
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: GTF2IP4 ;
ROSE Overlap GTF2IP1 ; GTF2IP4 ;
ROSE Proximal NCF1B ;
ROSE Closest GTF2IP4 ;
Lasso ;
PreSTIGE ;
ABC TYW1B ; SBDSP1 ; NSUN5 ; BAZ1B ; BCL7B ; TBL2 ; MLXIPL ; VPS37D ; DNAJC30 ; BUD23 ; STX1A ; ABHD11-AS1 ; ABHD11 ; CLDN3 ; CLDN4 ; WBSCR27 ; GTF2IRD1 ; LAT2 ; LIMK1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200509 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers