SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227200377
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr16:57795813-57831925
Size: 36112
Super-enhancer rank 377
Number of SE elements: 14
ChIP density(Case|Control): 22259.4368|2491.728
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC388282 ;
ROSE Overlap KIFC3 ; LOC388282 ;
ROSE Proximal MIR6772 ;
ROSE Closest LOC388282 ;
Lasso ;
PreSTIGE ;
ABC KIFC3 ; LOC388282 ; DOK4 ; ADGRG3 ; KATNB1 ; CCDC102A ; ZNF319 ; USB1 ; MMP15 ; GINS3 ; GOT2 ; DRC7 ; SETD6 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200377 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers