SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227200351
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr1:201500254-201542886
Size: 42632
Super-enhancer rank 351
Number of SE elements: 14
ChIP density(Case|Control): 24087.08|3632.2464
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RPS10P7 ;
ROSE Overlap CSRP1 ; RPS10P7 ;
ROSE Proximal CSRP1 ; PHLDA3 ;
ROSE Closest RPS10P7 ;
Lasso ;
PreSTIGE ;
ABC TNNT2 ; LAD1 ; PHLDA3 ; CSRP1 ; RPS10P7 ; NAV1 ; IPO9 ; IPO9-AS1 ; SHISA4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200351 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers