SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227200244
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr6:6842296-6894623
Size: 52327
Super-enhancer rank 244
Number of SE elements: 33
ChIP density(Case|Control): 28371.6994|3893.1288
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RREB1 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest RREB1 ;
Lasso ;
PreSTIGE ;
ABC SLC35B3 ; LOC100506207 ; EEF1E1 ; FARS2 ; LYRM4 ; SSR1 ; RREB1 ; LY86 ; CAGE1 ; RIOK1 ; DSP ; F13A1 ; NRN1 ; SNRNP48 ; TXNDC5 ; BLOC1S5-TXNDC5 ; BLOC1S5 ; EEF1E1-BLOC1S5 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200244 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers