SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_227200242
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr5:150624511-150657332
Size: 32821
Super-enhancer rank 242
Number of SE elements: 14
ChIP density(Case|Control): 26614.5489|2113.6724
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SYNPO ;
ROSE Overlap SYNPO ;
ROSE Proximal MYOZ3 ; RBM22 ;
ROSE Closest SYNPO ;
Lasso ;
PreSTIGE ;
ABC GM2A ; TCOF1 ; CD74 ; SPARC ; RPS14 ; NDST1-AS1 ; NDST1 ; SYNPO ; RBM22 ; FAT2 ; DCTN4 ; SMIM3 ; CCDC69 ; ZNF300 ; ZNF300P1 ; SLC36A1 ; CTB-113P19.1 ; GPX3 ; TNIP1 ; ANXA6 ; LOC100652758 ; G3BP1 ; ATOX1 ; CSF1R ; PDGFRB ; ARSI ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200242 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers