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Super-enhancer overview

SE ID: SE_02_227200234
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr12:122871477-122948521
Size: 77044
Super-enhancer rank 234
Number of SE elements: 21
ChIP density(Case|Control): 31079.5496|6279.086
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: VPS37B ;
ROSE Overlap ABCB9 ; VPS37B ;
ROSE Proximal OGFOD2 ; HIP1R ; ARL6IP4 ;
ROSE Closest VPS37B ;
Lasso ;
PreSTIGE ;
ABC KNTC1 ; RSRC2 ; ZCCHC8 ; HIP1R ; CCDC62 ; CLIP1 ; CLIP1-AS1 ; HCAR2 ; LOC101593348 ; DIABLO ; DENR ; HCAR1 ; VPS33A ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200234 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers