SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227200232
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr3:49442416-49485446
Size: 43030
Super-enhancer rank 232
Number of SE elements: 7
ChIP density(Case|Control): 27978.106|3072.342
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DAG1 ;
ROSE Overlap DAG1 ;
ROSE Proximal DAG1 ; AMT ; NICN1 ; TCTA ; RHOA ;
ROSE Closest DAG1 ;
Lasso ;
PreSTIGE ;
ABC TCTA ; RHOA ; AMT ; NICN1 ; USP4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200232 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers