SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227200228
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr5:149439138-149498185
Size: 59047
Super-enhancer rank 228
Number of SE elements: 17
ChIP density(Case|Control): 29771.4974|4635.1895
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR145 ;
ROSE Overlap CSNK1A1 ;
ROSE Proximal MIR143HG ; MIR143 ; MIR145 ;
ROSE Closest MIR145 ;
Lasso ;
PreSTIGE ;
ABC CSF1R ; HMGXB3 ; TIGD6 ; PDGFRB ; ARSI ; TCOF1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200228 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers