SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227200204
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr19:18410413-18461583
Size: 51170
Super-enhancer rank 204
Number of SE elements: 16
ChIP density(Case|Control): 29182.251|3162.306
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ISYNA1 ;
ROSE Overlap ISYNA1 ; SSBP4 ; ELL ;
ROSE Proximal GDF15 ; MIR3189 ; LRRC25 ; ISYNA1 ;
ROSE Closest ISYNA1 ;
Lasso ;
PreSTIGE ;
ABC GDF15 ; KIAA1683 ; JUND ; LOC729966 ; LOC102725254 ; PGPEP1 ; LRRC25 ; LSM4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200204 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers