SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227200100
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr3:193825537-193912473
Size: 86936
Super-enhancer rank 100
Number of SE elements: 31
ChIP density(Case|Control): 42216.1216|7285.2368
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: LOC647323 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest DPPA2P3 ;
Lasso ;
PreSTIGE ;
ABC LINC02026 ; LINC02028 ; HES1 ; LINC00887 ; LINC00884 ; TMEM44-AS1 ; TMEM44 ; OPA1 ; LINC02036 ; LINC02037 ; LSG1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200100 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers