SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227200004
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P34_12wks_F
Genomic region: chr7:47438459-47579505
Size: 141046
Super-enhancer rank 4
Number of SE elements: 69
ChIP density(Case|Control): 87392.1016|9929.6384
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: TNS3 ;
ROSE Overlap TNS3 ;
ROSE Proximal LINC01447 ;
ROSE Closest TNS3 ;
Lasso ;
PreSTIGE ;
ABC LINC01447 ; TNS3 ; IGFBP3 ; C7orf57 ; HUS1 ; UPP1 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227200004 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers