SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_227101023
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr1:201499126-201513028
Size: 13902
Super-enhancer rank 1023
Number of SE elements: 1
ChIP density(Case|Control): 22168.1292|927.2634
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CSRP1 ;
ROSE Overlap CSRP1 ;
ROSE Proximal CSRP1 ; RPS10P7 ; PHLDA3 ;
ROSE Closest CSRP1 ;
Lasso ;
PreSTIGE ;
ABC TNNT2 ; LAD1 ; PHLDA3 ; CSRP1 ; RPS10P7 ; NAV1 ; IPO9 ; IPO9-AS1 ; SHISA4 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227101023 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers