SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_227100849
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr9:136985055-137004238
Size: 19183
Super-enhancer rank 849
Number of SE elements: 5
ChIP density(Case|Control): 25116.3019|1367.7479
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CLIC3 ;
ROSE Overlap C9orf142 ; CLIC3 ; LCNL1 ;
ROSE Proximal ABCA2 ; FBXW5 ; ENTPD2 ; C9orf139 ; FUT7 ; NPDC1 ; LCN12 ; C8G ; PTGDS ;
ROSE Closest CLIC3 ;
Lasso ;
PreSTIGE ;
ABC WDR5 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100849 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers