SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_227100824
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr1:144957956-145020367
Size: 62411
Super-enhancer rank 824
Number of SE elements: 22
ChIP density(Case|Control): 28290.9063|4019.2684
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SRGAP2B ;
ROSE Overlap SRGAP2B ;
ROSE Proximal ;
ROSE Closest SRGAP2B ;
Lasso ;
PreSTIGE ;
ABC SEC22B ; NOTCH2NL ; NBPF10 ; LOC100996724 ; NUDT17 ; PDE4DIP ; GPR89A ; POLR3C ; RNF115 ; NBPF13P ; PEX11B ; GNRHR2 ; RBM8A ; LIX1L ; FMO5 ; ANKRD34A ; POLR3GL ; TXNIP ; LINC01719 ; PIAS3 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100824 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers