SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_227100767
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr12:54408762-54425259
Size: 16497
Super-enhancer rank 767
Number of SE elements: 1
ChIP density(Case|Control): 26909.9064|1347.8049
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: ITGA5 ;
ROSE Overlap LOC102724050 ; ITGA5 ;
ROSE Proximal GPR84 ; ZNF385A ; GTSF1 ;
ROSE Closest ITGA5 ;
Lasso ;
PreSTIGE ;
ABC HOXC5 ; HOXC8 ; HOXC4 ; HOXC6 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100767 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers