SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227100693
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr13:41594902-41652969
Size: 58067
Super-enhancer rank 693
Number of SE elements: 22
ChIP density(Case|Control): 32749.788|5481.5248
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: MIR5006 ;
ROSE Overlap VWA8 ;
ROSE Proximal MIR5006 ;
ROSE Closest MIR5006 ;
Lasso ;
PreSTIGE ;
ABC NAA16 ; MTRF1 ; MRPS31 ; SLC25A15 ; TPTE2P5 ; SUGT1P3 ; ELF1 ; KBTBD7 ; RGCC ; WBP4 ; KBTBD6 ; LOC101929140 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100693 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers