SEdb 3.0
  1. Search
  2. Super-enhancer search result
  3. Super-enhancer detail

Super-enhancer overview

SE ID: SE_02_227100683
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr19:4367935-4400667
Size: 32732
Super-enhancer rank 683
Number of SE elements: 10
ChIP density(Case|Control): 29992.3316|2484.3588
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: SH3GL1 ;
ROSE Overlap SH3GL1 ;
ROSE Proximal STAP2 ; CHAF1A ; MPND ; MIR4746 ;
ROSE Closest SH3GL1 ;
Lasso ;
PreSTIGE ;
ABC SH3GL1 ; CHAF1A ; STAP2 ; MPND ; SIRT6 ; TNFAIP8L1 ; SEMA6B ; UBXN6 ; FSD1 ; TMIGD2 ; EEF2 ; EBI3 ; CCDC94 ; MAP2K2 ; PLIN5 ; LRG1 ; HDGFRP2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100683 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
Download bed

Overlap with other super-enhancers