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Super-enhancer search result
Super-enhancer detail
Super-enhancer overview
SE ID:
SE_02_227100607
Species:
Human
Data source:
NCBI GEO/SRA
Biosample type:
Cell line
Tissue type:
Placenta villous core
Biosample name:
P32_39wks_F
Genomic region:
chr3:128412239-128456842
Size:
44603
Super-enhancer rank
:
607
Number of SE elements:
15
ChIP density(Case|Control):
33238.1556|3608.3827
Genome browser:
Super-enhancer associated network
Super-enhancer annotation
Common SNP
eQTL
Risk SNP
TFBS conserved
CRISPR/Cas9 target site
DHS
Enhancer
Methylation-450K
TAD
Chromatin accessibility region
Methylation-WGBS
Chromatin interaction
eRNA
1~5
5~10
10~MAX
Super-enhancer associated genes
Strategies/Algorithm
Gene name
The closest active:
DNAJB8-AS1
;
ROSE Overlap
;
ROSE Proximal
DNAJB8
;
GATA2
;
GATA2-AS1
;
DNAJB8-AS1
;
ROSE Closest
DNAJB8-AS1
;
Lasso
;
PreSTIGE
;
ABC
RAB7A
;
RPN1
;
BETA
;
Network diagram of super-enhancer and associated genes
Expression of
SE_02_227100607
associated genes
Cell line (ENCODE)
Primary cell (ENCODE)
Normal tissue (GTEx)
Cell line (CCLE)
Cancer (TCGA)
TF/TcoF/CR Binding to Super-enhancer
TcoF Identified
Chromatin Regulators Identified
TF Identified by ChIP-seq
TF Predicted by Motif
Super-enhancer element (H3K27ac)
1~5
5~10
10~MAX
Download bed
Overlap with other super-enhancers