SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227100605
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr17:42378906-42440999
Size: 62093
Super-enhancer rank 605
Number of SE elements: 22
ChIP density(Case|Control): 34300.1732|4650.7657
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: PTRF ;
ROSE Overlap PTRF ; STAT3 ;
ROSE Proximal ATP6V0A1 ;
ROSE Closest PTRF ;
Lasso ;
PreSTIGE ;
ABC SLC25A39 ; GRN ; RUNDC3A ; RUNDC3A-AS1 ; UBTF ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100605 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers