SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227100580
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr20:19735365-19787419
Size: 52054
Super-enhancer rank 580
Number of SE elements: 11
ChIP density(Case|Control): 34969.8772|4476.644
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: RIN2 ;
ROSE Overlap ;
ROSE Proximal ;
ROSE Closest RIN2 ;
Lasso ;
PreSTIGE ;
ABC ZNF133 ; DZANK1 ; POLR3F ; LINC01726 ; XRN2 ; KIZ ; RALGAPA2 ; CFAP61 ; NAA20 ; RIN2 ; LINC00652 ; LOC100270804 ; DTD1 ; LINC00493 ; SMIM26 ; SEC23B ; RBBP9 ; PET117 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100580 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers