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Super-enhancer overview

SE ID: SE_02_227100558
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr1:229319179-229364539
Size: 45360
Super-enhancer rank 558
Number of SE elements: 12
ChIP density(Case|Control): 35285.544|3964.464
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CCSAP ;
ROSE Overlap CCSAP ;
ROSE Proximal RAB4A ; SPHAR ;
ROSE Closest CCSAP ;
Lasso ;
PreSTIGE ;
ABC LOC101927478 ; NUP133 ; CCSAP ; RAB4A ; RHOU ; RNF187 ; ABCB10 ; TAF5L ; GALNT2 ; URB2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100558 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers