SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227100518
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr11:27379970-27434054
Size: 54084
Super-enhancer rank 518
Number of SE elements: 13
ChIP density(Case|Control): 37036.7232|4245.594
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: CCDC34 ;
ROSE Overlap LGR4 ;
ROSE Proximal CCDC34 ; LOC105376671 ;
ROSE Closest CCDC34 ;
Lasso ;
PreSTIGE ;
ABC CCDC34 ; FIBIN ; LGR4 ; ANO3 ; LIN7C ; LOC105376671 ; BDNF-AS ; BDNF ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100518 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers