SEdb 3.0
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Super-enhancer overview

SE ID: SE_02_227100443
Species: Human
Data source: NCBI GEO/SRA
Biosample type: Cell line
Tissue type: Placenta villous core
Biosample name: P32_39wks_F
Genomic region: chr2:25435836-25523109
Size: 87273
Super-enhancer rank 443
Number of SE elements: 29
ChIP density(Case|Control): 44456.8662|7723.6605
Genome browser:
Super-enhancer associated network

Super-enhancer annotation

1~5
5~10
10~MAX

Super-enhancer associated genes

Strategies/Algorithm Gene name
The closest active: DNMT3A ;
ROSE Overlap DTNB ;
ROSE Proximal ;
ROSE Closest DNMT3A ;
Lasso ;
PreSTIGE ;
ABC ASXL2 ; FAM228B ; KIF3C ; TP53I3 ; PFN4 ; DTNB ; SF3B6 ; WDCP ; ATAD2B ; MFSD2B ; UBXN2A ; DNAJC27 ; DNAJC27-AS1 ; EFR3B ; DNMT3A ; PTRHD1 ; MAPRE3 ; CENPA ; KCNK3 ; CIB4 ; OTOF ; DRC1 ; ADGRF3 ; SELENOI ; HADHB ; HADHA ; CENPO ; RAB10 ; ITSN2 ;
BETA ;

Network diagram of super-enhancer and associated genes

Expression of SE_02_227100443 associated genes

Cell line (ENCODE) Primary cell (ENCODE) Normal tissue (GTEx) Cell line (CCLE) Cancer (TCGA)

TF/TcoF/CR Binding to Super-enhancer


Super-enhancer element (H3K27ac)

1~5
5~10
10~MAX
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Overlap with other super-enhancers